Q-bank organism group |
Locus |
Abbreviation |
Ceratocystis |
Internal transcribed spacers of the nrDNA operon |
ITS |
Translation elongation factor 1-alpha |
TEF |
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Colletotrichum |
Internal transcribed spacers of the nrDNA operon |
ITS |
Actin |
ACT |
Beta-tubulin |
TUB2 |
Calmodulin |
CAL |
Chitin synthase |
CHS-1 |
DNA lyase Apn1 and mating type protein Mat1-like gene |
APN1/MAT1 |
Glutamine synthase |
GS |
Glyceraldehyde-3-phosphate dehydrogenase |
GAPDH |
Histone H3 |
HIS-3 |
Manganese-superoxide dismutase |
SOD2 |
Mating type protein MAT1-2 |
MAT1-2 |
Putative DNA lyase |
APN2 |
RNA polymerase II second largest subunit |
RPB2 |
18S nrDNA small subunit |
SSU |
28S nrDNA large subunit |
LSU |
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Show middle five loci for this group in matrix format |
Show last five loci for this group in matrix format |
Melampsora |
Internal transcribed spacers of the nrDNA operon |
ITS |
Cytochrome oxidase I |
COI |
28S nrDNA large subunit |
LSU |
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Monilinia |
Internal transcribed spacers of the nrDNA operon |
ITS |
Translation elongation factor 1-alpha |
TEF |
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Mycosphaerella and anamorphs |
Internal transcribed spacers of the nrDNA operon |
ITS |
Actin |
ACT |
Beta-tubulin |
TUB2 |
Calmodulin |
CAL |
RNA polymerase II second largest subunit |
RPB2 |
Translation elongation factor 1-alpha |
TEF |
28S nrDNA large subunit |
LSU |
Show first five loci for this group in matrix format |
Show last two loci for this group in matrix format |
Phoma(-like) genera |
Internal transcribed spacers of the nrDNA operon |
ITS |
Actin |
ACT |
Beta-tubulin |
TUB2 |
Calmodulin |
CAL |
Chitin synthase |
CHS-1 |
RNA polymerase II largest subunit |
RPB1 |
Translation elongation factor 1-alpha |
TEF |
18S nrDNA small subunit |
SSU |
28S nrDNA large subunit |
LSU |
Show first five loci for this group in matrix format |
Show last four loci for this group in matrix format |
Phyllosticta/Guignardia |
Internal transcribed spacers of the nrDNA operon |
ITS |
Actin |
ACT |
Glyceraldehyde-3-phosphate dehydrogenase |
GAPDH |
Translation elongation factor 1-alpha |
TEF |
28S nrDNA large subunit |
LSU |
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Phytophthora |
Internal transcribed spacers of the nrDNA operon |
ITS |
Beta-tubulin |
TUB2 |
Cytochrome oxidase I |
COI |
Cytochrome oxidase II |
COII |
Intergenic spacer of the nrDNA operon |
IGS |
Ras-related protein-coding gene |
YPT1 |
Translation elongation factor 1-alpha |
TEF |
Show first five loci for this group in matrix format |
Show last two loci for this group in matrix format |
Puccinia |
Internal transcribed spacers of the nrDNA operon |
ITS |
Intergenic spacer of the nrDNA operon |
IGS |
28S nrDNA large subunit |
LSU |
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Stenocarpella |
Internal transcribed spacers of the nrDNA operon |
ITS |
Translation elongation factor 1-alpha |
TEF |
28S nrDNA large subunit |
LSU |
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Thecaphora |
Internal transcribed spacers of the nrDNA operon |
ITS |
28S nrDNA large subunit |
LSU |
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Verticillium |
Internal transcribed spacers of the nrDNA operon |
ITS |
Actin |
ACT |
Calmodulin |
CAL |
Cytochrome oxidase I |
COI |
Intergenic spacer of the nrDNA operon |
IGS |
28S nrDNA large subunit |
LSU |
Show first three loci for this group in matrix format |
Show last three loci for this group in matrix format |